PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc001346.1_g00002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 75aa    MW: 8418.72 Da    PI: 6.7793
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc001346.1_g00002.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.72.8e-161466150
                      NAM  1 lppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdiykvePwdLpkk 50
                             lppGfrFhP+deel+++yL+kk++g+   ++l    + evd++k+ePwd+p +
  Itr_sc001346.1_g00002.1 14 LPPGFRFHPRDEELICDYLAKKINGSGdpHHLRPPfLIEVDLNKCEPWDIPGE 66
                             79**********************99855444333499************954 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-17667IPR003441NAC domain
PROSITE profilePS5100518.571475IPR003441NAC domain
PfamPF023656.5E-81550IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    Send to blast
MNSGGSLSMV EAKLPPGFRF HPRDEELICD YLAKKINGSG DPHHLRPPFL IEVDLNKCEP  60
WDIPGEIPRA AKLRP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016579583.16e-25PREDICTED: NAC domain-containing protein 21/22-like
SwissprotQ84TE62e-21NAC22_ARATH; NAC domain-containing protein 21/22
TrEMBLQ6JTA77e-25Q6JTA7_CAPAN; Salicylic acid-induced protein 19
STRINGPGSC0003DMT4000569164e-24(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2277322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12977.19e-25NAC family protein